MouseBIRN.MouseBIRNMeeting2008 (r1.1 vs. r1.14)
Diffs

 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.14 - 30 Jun 2008 - SethRuffins)

META TOPICPARENT MouseBIRNAnnouncements
Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting
Line: 66 to 66
META FILEATTACHMENT 200805AHMPluginArchitecture.ppt attr="" comment="MBAT Plugin Architecture" date="1213226922" path="E:\Shared\MBAT\doc\[200805 AHM] Plugin Architecture.ppt" size="1709056" user="dlee" version="1.1"
META FILEATTACHMENT web_services_session-ilya.ppt attr="" comment="Uniform API" date="1213628906" path="web_services_session-ilya.ppt" size="193024" user="Seth" version="1.1"
META FILEATTACHMENT aidb-jeff-B..ppt attr="" comment="AIDB evaluation" date="1213628973" path="aidb-jeff-B..ppt" size="93184" user="Seth" version="1.1"
Added:
>
>
META FILEATTACHMENT MouseBIRNAHM2008?_2.ppt attr="" comment="Maryann Ontology presentation" date="1214830119" path="MouseBIRNAHM2008_2.ppt" size="8039424" user="Seth" version="1.1"

 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.13 - 16 Jun 2008 - SethRuffins)

META TOPICPARENT MouseBIRNAnnouncements
Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting
Line: 64 to 64

META FILEATTACHMENT 200805AHMMBAT.ppt attr="" comment="MBAT Implementation" date="1213226899" path="E:\Shared\MBAT\doc\[200805 AHM] MBAT.ppt" size="2338304" user="dlee" version="1.1"
META FILEATTACHMENT 200805AHMPluginArchitecture.ppt attr="" comment="MBAT Plugin Architecture" date="1213226922" path="E:\Shared\MBAT\doc\[200805 AHM] Plugin Architecture.ppt" size="1709056" user="dlee" version="1.1"
Added:
>
>
META FILEATTACHMENT web_services_session-ilya.ppt attr="" comment="Uniform API" date="1213628906" path="web_services_session-ilya.ppt" size="193024" user="Seth" version="1.1"
META FILEATTACHMENT aidb-jeff-B..ppt attr="" comment="AIDB evaluation" date="1213628973" path="aidb-jeff-B..ppt" size="93184" user="Seth" version="1.1"

 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.12 - 11 Jun 2008 - DarenLee)

META TOPICPARENT MouseBIRNAnnouncements
Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting
Line: 9 to 9
  • Attendees are responsible for parking fees and alcohol at Thursday's dinner
Changed:
<
<
May 29, 2008
>
>
May 29, 2008 Presentations

8:30 AM - 8:50 AM Breakfast, Introduction & Welcome Arthur Toga & Seth Ruffins
 
8:50 AM-11:00 AM Overview of use of mouse BIRN tools and apps
Line: 25 to 25
10:50 AM-11:10 AM Arthur Toga, UCLA
 
11:10 AM-Noon MBAT reengineering overview
Changed:
<
<
11:10-11:30 Daren Lee MBAT technical lead, UCLA
>
>
11:10-11:30 Daren Lee MBAT technical lead, UCLA MBAT Implementation.ppt

11:30 AM-Noon Reengineering discussion & implication for the future development
 
Noon -1:00 PM LUNCH
Line: 45 to 45
 
4:30 - 6:30 Social Mixer
 
Changed:
<
<
6:30 PM DINNER
>
>
6:30 PM DINNER

 
May 30th, 2008
 
Line: 58 to 58
1:00 PM - 2:30 PM Programmers: Review needs and wants (technical feasibility)
Assign Tasks and set milestones
(Led by Daren Lee)
2:30 PM - 2:45 PM Break
2:45 PM - 4:00 PM Programmers Break Out Sessions
Changed:
<
<
2:45 PM - 3:00 PM Overview
(Daren)
3:00 PM - 3:30 PM Concept Mapper / Mediator
(Steve, Jeff G, Vadim, Brian) 		AIDB + XCEDE
(Daren,Queenie, Jeff B, Edriss, Asif)
3:30 PM - 4:30 PM CCDB 3D API / Registration Workflow / SmartAtlas ROI
(Daren, Queenie, Willy, Asif)
>
>
2:45 PM - 3:00 PM Overview
(Daren) 		Plugin Architecture.ppt
3:00 PM - 3:30 PM Concept Mapper,Mediator
(Steve, Jeff G, Vadim, Brian) 		AIDB + XCEDE
(Daren,Queenie, Jeff B, Edriss, Asif) 		Meeting Minutes
3:30 PM - 4:30 PM CCDB 3D API / Registration Workflow / SmartAtlas ROI
(Daren, Queenie, Willy, Asif)

Added:
>
>
META FILEATTACHMENT 200805AHMMBAT.ppt attr="" comment="MBAT Implementation" date="1213226899" path="E:\Shared\MBAT\doc\[200805 AHM] MBAT.ppt" size="2338304" user="dlee" version="1.1"
META FILEATTACHMENT 200805AHMPluginArchitecture.ppt attr="" comment="MBAT Plugin Architecture" date="1213226922" path="E:\Shared\MBAT\doc\[200805 AHM] Plugin Architecture.ppt" size="1709056" user="dlee" version="1.1"

 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.11 - 21 May 2008 - JeffBrandenburg)

META TOPICPARENT MouseBIRNAnnouncements
Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting
Line: 36 to 36
1:20PM - 1:30PM GeneNetwork - Rob Williams
1:30PM - 1:40PM Allen Brain Atlas - Seth Ruffins
1:40 PM -2:10PM Jinx, SmartAtlas-phenote, Concept Mapper 2 - Maryanne Martone
Changed:
<
<
2:10PM - 2:20PM AIDB - Jeff Brandonberg
>
>
2:10PM - 2:20PM AIDB - Jeff Brandenburg

2:20PM - 3:00PM Application features and use forum
 
3:00-3:15 Break

 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.10 - 21 May 2008 - DarenLee)

META TOPICPARENT MouseBIRNAnnouncements
Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting
Line: 9 to 9
  • Attendees are responsible for parking fees and alcohol at Thursday's dinner
Deleted:
<
<		 Suggested Schedule as of February 29th 2008

May 29, 2008
8:30 AM - 8:50 AM Breakfast, Introduction & Welcome Arthur Toga & Seth Ruffins
 
Line: 27 to 25
10:50 AM-11:10 AM Arthur Toga, UCLA
 
11:10 AM-Noon MBAT reengineering overview
Changed:
<
<
11:10-11:30 Daren Lee MBAT technical lead, UCLA
>
>
11:10-11:30 Daren Lee MBAT technical lead, UCLA

11:30 AM-Noon Reengineering discussion & implication for the future development
 
Noon -1:00 PM LUNCH
 
1:00 PM-3:00 PM Application Blitz
Changed:
<
<
1:00PM - 1:10PM MBAT 2 - Daren Lee, Queenie Ng, Seth Ruffins
>
>
1:00PM - 1:10PM MBAT 2 - Daren Lee, Queenie Ng, Steve Anderson, Seth Ruffins

1:10PM - 1:20PM Neuroterrain - Yoni Nissanov
1:20PM - 1:30PM GeneNetwork - Rob Williams
1:30PM - 1:40PM Allen Brain Atlas - Seth Ruffins
Changed:
<
<
1:40 PM -2:10PM Jinx, SmartAtlas?-phenote, Concept Mapper 2 - Maryanne Martone
>
>
1:40 PM -2:10PM Jinx, SmartAtlas-phenote, Concept Mapper 2 - Maryanne Martone

2:10PM - 2:20PM AIDB - Jeff Brandonberg
2:20PM - 3:00PM Application features and use forum
 
Line: 64 to 62
3:00 PM - 3:30 PM Concept Mapper / Mediator
(Steve, Jeff G, Vadim, Brian) 		AIDB + XCEDE
(Daren,Queenie, Jeff B, Edriss, Asif)
3:30 PM - 4:30 PM CCDB 3D API / Registration Workflow / SmartAtlas ROI
(Daren, Queenie, Willy, Asif)
Deleted:
<
<		 *Tasks by programmers will be determined soon. We may consider inviting some programmers from the other BIRN testbeds depending on the tasks we wish to accomplish during these days.

 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.9 - 20 May 2008 - SethRuffins)

META TOPICPARENT MouseBIRNAnnouncements
Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting
Line: 12 to 12

 Suggested Schedule as of February 29th 2008

May 29, 2008
Changed:
<
<
9:00 AM-11:00 AM Our Data in MBAT PIs
11:00 AM-12:00 PM Overview of what we've done and what's next Arthur/Seth
12:00 PM-1:00 PM LUNCH Grab Grub
1:00 PM-5:00 PM Break into Two Sessions
Programmers tasks Biologists
Implement first version of universal APIs for AIDB and Microarray Tutorials
Gather requirements and bugs
Summarize users "wants"
Prioritize users "wants"
5:00 PM-6:30 PM Socializing/Happy Hour
6:30 PM DINNER
>
>
8:30 AM - 8:50 AM Breakfast, Introduction & Welcome Arthur Toga & Seth Ruffins
 
8:50 AM-11:00 AM Overview of use of mouse BIRN tools and apps
 
8:50 AM - 9:10 AM Russell Jacobs, Caltech
9:10 AM - 9:30A M Rob Williams, UTHSC
9:30 AM - 9:50 AM Yoni Nissanov, Drexel University
 
9:50 AM -1 0:10 AM Break
 
10:10 AM-10:30 AM Al Johnson, Duke University
10:30 AM-10:50 AM Mark Ellisman & Maryann Marton, UCSD
10:50 AM-11:10 AM Arthur Toga, UCLA
 
11:10 AM-Noon MBAT reengineering overview
11:10-11:30 Daren Lee MBAT technical lead, UCLA
11:30 AM-Noon Reengineering discussion & implication for the future development
 
Noon -1:00 PM LUNCH
 
1:00 PM-3:00 PM Application Blitz
1:00PM - 1:10PM MBAT 2 - Daren Lee, Queenie Ng, Seth Ruffins
1:10PM - 1:20PM Neuroterrain - Yoni Nissanov
1:20PM - 1:30PM GeneNetwork - Rob Williams
1:30PM - 1:40PM Allen Brain Atlas - Seth Ruffins
1:40 PM -2:10PM Jinx, SmartAtlas?-phenote, Concept Mapper 2 - Maryanne Martone
2:10PM - 2:20PM AIDB - Jeff Brandonberg
2:20PM - 3:00PM Application features and use forum
 
3:00-3:15 Break
 
3:15- 4:30 Application features and use forum (continued)
 
4:30 - 6:30 Social Mixer
 
6:30 PM DINNER
 

May 30th, 2008
Added:
>
>
 

8:30 AM - 9:00 AM Breakfast
9:00 AM - 10:30 AM PI Meeting Universal API, MAGE/FUGE
(Ilya Zaslavsky and Rob Williams)
10:30 AM - 10:45 AM Break

 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.8 - 20 May 2008 - DarenLee)

META TOPICPARENT MouseBIRNAnnouncements
Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting
Line: 26 to 26

May 30th, 2008
8:30 AM - 9:00 AM Breakfast
Changed:
<
<
9:00 AM - 10:30 AM PI Meeting Universal API, MAGE/FUGE
(Ilya Zaslavsky and Rob Williams)
>
>
9:00 AM - 10:30 AM PI Meeting Universal API, MAGE/FUGE
(Ilya Zaslavsky and Rob Williams)

10:30 AM - 10:45 AM Break
Changed:
<
<
10:45 AM - 11:15 AM Presentation of needs and wants to Programmers
(Led by Seth Ruffins)
>
>
10:45 AM - 11:15 AM Presentation of needs and wants to Programmers
(Led by Seth Ruffins)

11:15 AM - 12:00PM Tasks, priorities, and timelines (realistic goals)
12:00 PM - 1:00 PM Lunch
Changed:
<
<
1:00 PM - 2:30 PM Programmers: Review needs and wants (technical feasibility)
Assign tasks and set milestones
(Led by Daren Lee)
>
>
1:00 PM - 2:30 PM Programmers: Review needs and wants (technical feasibility)
Assign Tasks and set milestones
(Led by Daren Lee)

2:30 PM - 2:45 PM Break
2:45 PM - 4:00 PM Programmers Break Out Sessions
Changed:
<
<
2:45 PM - 3:00 PM Overview
(Daren)
3:00 PM - 3:30 PM Concept Mapper / Mediator AIDB + XCEDE
(Steve, Jeff G., Vadim, Brian) (Daren, Queenie, Jeff B, Edriss, Asif)
3:30 PM - 4:30 PM CCDB 3D API / Registration Workflow / SmartAtlas ROI
(Daren, Queenie, Willy, Asif)
>
>
2:45 PM - 3:00 PM Overview
(Daren)
3:00 PM - 3:30 PM Concept Mapper / Mediator
(Steve, Jeff G, Vadim, Brian) 		AIDB + XCEDE
(Daren,Queenie, Jeff B, Edriss, Asif)
3:30 PM - 4:30 PM CCDB 3D API / Registration Workflow / SmartAtlas ROI
(Daren, Queenie, Willy, Asif)

*Tasks by programmers will be determined soon. We may consider inviting some programmers from the other BIRN testbeds depending on the tasks we wish to accomplish during these days.


 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.7 - 19 May 2008 - DarenLee)

META TOPICPARENT MouseBIRNAnnouncements
Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting
Line: 42 to 42
(Daren)
3:00 PM - 3:30 PM Concept Mapper / Mediator AIDB + XCEDE
(Steve, Jeff G., Vadim, Brian) (Daren, Queenie, Jeff B, Edriss, Asif)
Changed:
<
<
3:30 PM - 4:00 PM CCDB 3D API / Registration Workflow / SmartAtlas ROI
>
>
3:30 PM - 4:30 PM CCDB 3D API / Registration Workflow / SmartAtlas ROI

(Daren, Queenie, Willy, Asif)

*Tasks by programmers will be determined soon. We may consider inviting some programmers from the other BIRN testbeds depending on the tasks we wish to accomplish during these days.


 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.6 - 19 May 2008 - DarenLee)

META TOPICPARENT MouseBIRNAnnouncements
Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting
Line: 25 to 25
6:30 PM DINNER

May 30th, 2008
Changed:
<
<
9:00 AM-11:00 AM Two Sessions
9:00 AM-11:00 AM Programmers tasks Biologists
Wrap up implementation of universal API Vocabulary Review and Additions to BIRNLex
11:00 AM-12:00 PM Joint Session for Biologists to present their findings to Programmers
>
>
8:30 AM - 9:00 AM Breakfast
9:00 AM - 10:30 AM PI Meeting Universal API, MAGE/FUGE
(Ilya Zaslavsky and Rob Williams)
10:30 AM - 10:45 AM Break
10:45 AM - 11:15 AM Presentation of needs and wants to Programmers
(Led by Seth Ruffins)
11:15 AM - 12:00PM Tasks, priorities, and timelines (realistic goals)

12:00 PM-1:00 PM Lunch
Changed:
<
<
1:00 PM-2:00 PM Led by Programmers: Review information from Biologists
2:00 PM-4:00 PM Led by Programmers: Set up tasks/schedules/priorities
>
>
1:00 PM - 2:30 PM Programmers: Review needs and wants (technical feasibility)
Assign tasks and set milestones
(Led by Daren Lee)
2:30 PM - 2:45 PM Break
2:45 PM - 4:00 PM Programmers Break Out Sessions
2:45 PM - 3:00 PM Overview
(Daren)
3:00 PM - 3:30 PM Concept Mapper / Mediator AIDB + XCEDE
(Steve, Jeff G., Vadim, Brian) (Daren, Queenie, Jeff B, Edriss, Asif)
3:30 PM - 4:00 PM CCDB 3D API / Registration Workflow / SmartAtlas ROI
(Daren, Queenie, Willy, Asif)

*Tasks by programmers will be determined soon. We may consider inviting some programmers from the other BIRN testbeds depending on the tasks we wish to accomplish during these days.


 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.5 - 19 Mar 2008 - JylBoline)

META TOPICPARENT MouseBIRNAnnouncements
Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting
Line: 17 to 17
12:00 PM-1:00 PM LUNCH Grab Grub
1:00 PM-5:00 PM Break into Two Sessions
Programmers tasks Biologists
Changed:
<
<
TBD Tutorials
TBD Gather requirements and bugs
TBD Gather users "wants"
TBD Summarize users "wants"
TBD Prioritize users "wants"
>
>
Implement first version of universal APIs for AIDB and Microarray Tutorials
Gather requirements and bugs
Summarize users "wants"
Prioritize users "wants"

5:00 PM-6:30 PM Socializing/Happy Hour
6:30 PM DINNER

May 30th, 2008
9:00 AM-11:00 AM Two Sessions
9:00 AM-11:00 AM Programmers tasks Biologists
Changed:
<
<
TBD Vocabulary Review and Additions to BIRNLex
>
>
Wrap up implementation of universal API Vocabulary Review and Additions to BIRNLex

11:00 AM-12:00 PM Joint Session for Biologists to present their findings to Programmers
12:00 PM-1:00 PM Lunch
1:00 PM-2:00 PM Led by Programmers: Review information from Biologists

 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.4 - 04 Mar 2008 - MouseBIRN)

META TOPICPARENT MouseBIRNAnnouncements
Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting
Line: 20 to 20
TBD Tutorials
TBD Gather requirements and bugs
TBD Gather users "wants"
Added:
>
>
TBD Summarize users "wants"
TBD Prioritize users "wants"

5:00 PM-6:30 PM Socializing/Happy Hour
6:30 PM DINNER

May 30th, 2008
9:00 AM-11:00 AM Two Sessions
9:00 AM-11:00 AM Programmers tasks Biologists
Changed:
<
<
TBD Summarize users "wants"
TBD Prioritize users "wants"
>
>
TBD Vocabulary Review and Additions to BIRNLex

11:00 AM-12:00 PM Joint Session for Biologists to present their findings to Programmers
12:00 PM-1:00 PM Lunch
1:00 PM-2:00 PM Led by Programmers: Review information from Biologists

 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.3 - 01 Mar 2008 - JylBoline)

META TOPICPARENT MouseBIRNAnnouncements
Deleted:
<
<

Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting

Need to share rides to the Airport or get suggestions about the best hotels or restaurants? Go here to post comments about logistics for the meeting

Line: 9 to 8
  • Mouse BIRN meeting Thursday and Friday May 29-30th
  • Attendees are responsible for parking fees and alcohol at Thursday's dinner
Deleted:
<
<

Schedule as of February 29th 2007


Added:
>
>		 Suggested Schedule as of February 29th 2008

Changed:
<
<
May 29, 2008
>
>
May 29, 2008

9:00 AM-11:00 AM Our Data in MBAT PIs
Changed:
<
<
RESEARCH MODEL SESSION
11:00 AM-12:30 PM Research models progress/plans Diana, Allan, Joanna, Al/Alex, Rob, Daniel
12:30 PM-1:45 PM Lunch
1:45 PM-5:00 PM Group Discussion and Review of Modified Plans for Research Models
>
>
11:00 AM-12:00 PM Overview of what we've done and what's next Arthur/Seth
12:00 PM-1:00 PM LUNCH Grab Grub
1:00 PM-5:00 PM Break into Two Sessions
Programmers tasks Biologists
TBD Tutorials
TBD Gather requirements and bugs
TBD Gather users "wants"

5:00 PM-6:30 PM Socializing/Happy Hour
Changed:
<
<

7:00 PM-9:00 PM DINNER
>
>
6:30 PM DINNER

May 30th, 2008
Changed:
<
<
INTEGRATION DAY
9:00 AM-12:00 PM Working Sessions  
>
>
9:00 AM-11:00 AM Two Sessions
9:00 AM-11:00 AM Programmers tasks Biologists
TBD Summarize users "wants"
TBD Prioritize users "wants"
11:00 AM-12:00 PM Joint Session for Biologists to present their findings to Programmers

12:00 PM-1:00 PM Lunch
Changed:
<
<
1:00 PM-3:00 PM Working Sessions  
3:00 PM-4:00 PM Review of Action Items and Timelines  
>
>
1:00 PM-2:00 PM Led by Programmers: Review information from Biologists
2:00 PM-4:00 PM Led by Programmers: Set up tasks/schedules/priorities

*Tasks by programmers will be determined soon. We may consider inviting some programmers from the other BIRN testbeds depending on the tasks we wish to accomplish during these days.



 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.2 - 29 Feb 2008 - JylBoline)

META TOPICPARENT MouseBIRNAnnouncements
Changed:
<
<		 28 Feb 2008
>
>

Go here to REGISTER for the 2008 Mouse BIRN All Paws Meeting

Need to share rides to the Airport or get suggestions about the best hotels or restaurants? Go here to post comments about logistics for the meeting

This meeting will be held in Santa Barbara, at the Santa Barbara Inn

  • Mouse BIRN meeting Thursday and Friday May 29-30th
  • Attendees are responsible for parking fees and alcohol at Thursday's dinner

Schedule as of February 29th 2007

May 29, 2008
9:00 AM-11:00 AM Our Data in MBAT PIs
RESEARCH MODEL SESSION
11:00 AM-12:30 PM Research models progress/plans Diana, Allan, Joanna, Al/Alex, Rob, Daniel
12:30 PM-1:45 PM Lunch
1:45 PM-5:00 PM Group Discussion and Review of Modified Plans for Research Models
5:00 PM-6:30 PM Socializing/Happy Hour

7:00 PM-9:00 PM DINNER

May 30th, 2008
INTEGRATION DAY
9:00 AM-12:00 PM Working Sessions  
12:00 PM-1:00 PM Lunch
1:00 PM-3:00 PM Working Sessions  
3:00 PM-4:00 PM Review of Action Items and Timelines  


 <<O>>  Difference Topic MouseBIRNMeeting2008 (r1.1 - 28 Feb 2008 - JylBoline)
Line: 1 to 1
Added:
>
>
META TOPICPARENT MouseBIRNAnnouncements
28 Feb 2008

Topic: MouseBIRNMeeting2008 . { View | Diffs | r1.14 | > | r1.13 | > | r1.12 | More }

Revision r1.1 - 28 Feb 2008 - 02:21 - JylBoline
Revision r1.14 - 30 Jun 2008 - 12:48 - SethRuffins