MouseBIRN.UniversalWebServicesAPI (r1.3 vs. r1.4)
Diffs

 <<O>>  Difference Topic UniversalWebServicesAPI (r1.4 - 10 Mar 2008 - QueenieNg)

META TOPICPARENT CommonDataModel
TOC: No TOC in "MouseBIRN.UniversalWebServicesAPI"
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DataType API
  1. 2D, 3D data
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    • TBD ...

  1. Microarray data
    Methods Summary
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<		 |   getGenes(String geneCode, String geneName, String geneFunction, String keyWord)
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   getGenes(String geneCode, String geneName, String geneFunction, String keyWord)
      Get the gene information by either gene code, gene name, gene function or keyword.
   getProbe(String ProbesID String geneName, String geneCode)
      Get the probe information by either probe id, gene code, or gene name.
|   getStructures(String structureName, String geneCode, String geneName)

      Get the gene information by either gene code, gene name, gene function or keyword.|

Available Common Schema

XCEDE
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<		 XCEDE is the common schema providing access to BIRN databases. HID and the emerging AIDB are being wrapped in XCEDE (see http://www.na-mic.org/Wiki/index.php/Slicer3:Remote_Data_Handling, and - as deployed at BIRN-CC: http://bcc-dev-mediator.nbirn.net:8080/axis/services/HidQuerierWS?wsdl ). Web services are being written against XCEDE, so both HID and AIDB will be accessible through XCEDE web services. The goal, therefore, is to route common metadata requests against gene expression, 2d images, 3d volumes data, in XCEDE, and extend XCEDE to support additional requests.
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>		 XCEDE is the common schema providing access to BIRN databases. HID and the emerging AIDB are being wrapped in XCEDE (see http://www.na-mic.org/Wiki/index.php/Slicer3:Remote_Data_Handling), and - as deployed at BIRN-CC: http://bcc-dev-mediator.nbirn.net:8080/axis/services/HidQuerierWS?wsdl. Web services are being written against XCEDE, so both HID and AIDB will be accessible through XCEDE web services. The goal, therefore, is to route common metadata requests against gene expression, 2d images, 3d volumes data, in XCEDE, and extend XCEDE to support additional requests.

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MAGE/FUGE
MAGEv2 is being built on top of FuGE? as an extension to add in microarray specific classes (extending Data as ArrayDesign?, DesignElementData?, etc, Material as Array, QPCRPlate, etc, and DimensionElement? as DesignElement? extended by Feature, Reporter, and CompositeElement?).
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MAGE-ML/FUGE/MAGEv2
MAGE-ML is derived from Microarray Gene Expression Object Model (MAGE-OM), which is developed and described using the Unified Modelling Language (UML. MAGE-ML is by purpose used to describe microarray designs, microarray manufacturing information, microarray experiment setup and execution information, gene expression data and data analysis results.

MAGEv2 is being built on top of FuGE as an extension to add in microarray specific classes (extending Data as ArrayDesign, DesignElementData, etc, Material as Array, QPCRPlate, etc, and DimensionElement as DesignElement extended by Feature, Reporter, and CompositeElement).


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Topic: UniversalWebServicesAPI . { View | Diffs | r1.4 | > | r1.3 | > | r1.2 | More }

Revision r1.3 - 10 Mar 2008 - 17:38 - QueenieNg
Revision r1.4 - 10 Mar 2008 - 21:50 - QueenieNg