A mouse brain environment Should have a system of coordinates which can be related to a reference coordinate system (Paxinos Franklin) a reference atlas or brain ...

Things to do here: a) we will send the API and demos around b) review the API and demo communications, to see if it will fit your atlas (Willy and Joshua will help ...

See The original page where exchange of Atlas State was started Overview: Work resumed at the end of 2006 with a focus on setting up an Atlas Server that can be used ...

A mouse brain environment Should have a system of coordinates which can be related to a reference coordinate system (Paxinos Franklin) a reference atlas or brain ...

Go to Mouse BIRN Wiki Table of Contents Atlasing: Table of Contents of Working Pages TOC{"AtlasingUseCases" title "Atlasing Use Case Page"} TOC{"AtlasStateExchange ...

Use Cases AtlasIntegrationScenarios.doc: Expanded version of Mouse BIRN atlas integration scenario Use Case Work Page Atlas Wish List Features from Related Program ...

Planning Atlas workgroup meetings dealing with biological aspects of atlasing 2006 3 08 atlasingissues.doc: Minutes from atlasing WG discussion of structure hierarchy ...

First draft by Seth, Erh-Fang, and Jyl on 3/22/06 as conceptualized by Seth Ruffins and Mike Tyszka Need Documenation of what the goal is of this project including ...

Web-Services API Working Page Data-type Work Pages Gene Expression 2D images 3D volumes Supporting Documents MBATSchedule.xls MBAT Tech Guide2.doc MBATdesign.doc ...

EMAP (submitted by Seth) The Edinburgh Mouse Atlas Project(EMAP) is essentially composed of two major sections. An anatomy browser and gene expression database (EMAGE ...

Overview This page is a working page for the continued development to the Mouse BIRN Atlasing Toolkit (MBAT). Any suggestions are welcome. Goals Collaborative software ...

Overview This workgroup has been formed to tackle creating a neuroinformatics framework using multimodal digital atlases to coordinate access to disparate forms of ...

MouseBIRN Site Map Background Data Acquisitions and Processings Atlasing Data Federation Applications Resources Meetings and Events Background a. MouseBIRN i. About ...

Go to Mouse BIRN Wiki Table of Contents MouseBIRN Atlasing: Atlasing Working Pages Table of Contents The tool integration and prioritization taskforce has interoperable ...

Overview The goal of this area is to act as a resource area for mouse registration issues. Goals Discuss and solve practical issues of registration of atlases within ...

First Mouse group meeting to be held May 1, 20006: This meeting is to focus on what people have been doing in terms of registration of Nissl and MRI 3D volumes and ...

Defining "atlas" 1. Where can you access your atlas/program? 1. What coordinate system does your atlas use? 1. What terminology do you use to map your data? 1. What ...

Current terminologies Currently, MBAT has been released with two structure hierarchies that Allan adapted along with the BAMS group. These are the MAP2003S 256.ilf ...

jboline 13 Jul 2005 In Maryann's document, she lists several potential user workflows. I've tried to separate them into different functions: AtlasingWorkshopDay Visualization ...

Statistics for MouseBIRN Web Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic save and uploads: Nov 2009 15495 ...