| Description | Program Name | Details | Status | Tested | Problems & Issues | PipeModule | TWiki | Grid | CVS | SVN | Download |
|---|
| Flatten Cortical Surface | FlattenSurface | Maps the vertices of the cortical surface to a 2D map, presently represented as a pair of UIF files. | Done | No | need SWDL ID | Yes | Yes | Yes | CCB/FlattenSurface | No | Yes |
| Flatten Cortical Lines | MapContour | Maps a contour to a space according to a map defined by flatten cortical surface | Done | No | change name to FlattenContour | Yes | Yes | Yes | CCB/MapContour | No | No |
| Topological Contour Averager | FlatMapAverager | averages contours, accounting for a complex surface topology. | Done | No | need minor UI added | No | No | No | CCB/FlatMapAverager | No | No |
| Fluid Warp calculation tool | ComputeSurfaceWarp | given a set of flattend contours, and a flattened surface, calculates the warp field. | In Progress | No | debug covariant code, add flatmap topology (!) | No | No | No | CCB/ComputeSurfaceWarp | No | No |
| Fluid Warping tool | ApplyFlatMapWarp | applies a warp field to a flattened cortical surface. | In Progress | No | need flatmap topology added,(pending completion of f.map topology in surface warp). | No | No | No | CCB/ApplyWarp | No | No |
| Inflate Cortical Surface | InflateSurface | map the warped, flattened surfaces and lines to a 3 dimensional triangulated surface. | Done | | | No | No | No | CCB/InflateSurface | No | No |
| Inflate cortical lines | InflateContour | invert the cortical line flattening | Done | No | | No | No | No | CCB/InflateContour | No | No |
| Fluid Warp Pipeline | LONI Pipeline | a Pipeline dataflow implementing the fluid warp protocol. | Started | No | can't loop , or do foreach | N/A | No | No | N/A | No | No |
| InterpolateContour | InterpolateContour | resamples contour files (obj and ucf). | Done | No | need pipeline UI added | Yes | No | Yes | CCB/InterpolateContour | No | No |
| Check if contours are contained in flatmap | ContourTopologyChecker | Determines which contour files are in the flatmap, and which will "fall off". | Done | No | needs debugging | No | No | No | CCB/ContourTopologyChecker | No | No |
| Blend flattened surfaces | BlendFlatmap | Blends a dual and non-dual surface (.rdd files) | Done | No | needs testing | No | No | No | CCB/BlendFlatmap | No | No |
