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Agenda and Notes for 14 Oct 2008 Shape Tools meeting

prev. weeks to do

  • CS - JNI interface to ShapeTools readers
  • CS - Integrate triangle strip reader
  • CS - locate and evaluate methods for Mipav, FreeSurfer surface extraction.
  • CS - (with BC) write table translation appl. specification.
  • CS - diagnose why Shantanu's analyze file is not being read by the image coordinate tools.
  • RC - adapt fly wing protocols for warp tools.
  • RC complete adapting warp tools for curve match.
  • RC - write multigrid PDE solver library documents.
  • BC - WRite table translation tool,first revision to
  • BC - WRite table translation tool project definition page.
  • BC - modify ShapeReporter output to enumerate selected vertices.
  • BC - start work on shape density calculation tool

Discussed

Active Projects

  • JNI/C ShapeTools interface
  • modify WarpTools to use CurveMatch
  • modify fly warp tools to use warp tools methods
  • allow shape reporter's output to set vertex attribute colors
  • compute the local density of a surface mesh.

To do for Next meeting?

Unscheduled

  • CS - find definition of BrainVisa ribbon format, report to Ivo on feasibility of reading and using this file format
  • write RDD implementation that wraps a stack of buffered images.
  • CS, RC - write paper comparing steps of warp protocol with paul's protocol
  • CS write BrainVisa mesh ShapeToolsIO writer.
  • CS - Revise AttributeSet in shape tools core for safe concurrent access
  • CS - Integrate & release ColorSurface tool
  • CS - shape io gzip reader bug fix.
  • CS, RC - complete handout matching current warp protocol applications with older protocol applications.
  • BC - add a table edit mode to the color map control point dialog (shows control point values in editable spreadsheet).
  • RC - software download descriptions MultiGridPDE libary (do after Aug 14 meeting)
  • N/A - RGB to LAB color model interconversion. tool
  • N/A - create C/Java ShapeIO interface (eval. Swig, JNI for this purpose)
  • N/A - software download descriptions MultiGridPDE libary (do after Aug 14 meeting)
  • N/A - software to convolve an image with a shape.


Current Projects Status

Key: * = schedule work, completed. 0 = schedule work, uncompleted, [ ] - incomplete, unplanned, extra work, [X] = completed unplanned extra work.

Project Jul 08 4 Aug 11 Aug 18 Aug 25 Aug 1 Sep 08 8 Sep 08 Oct 08 Owner Helped By
Complete the Port of Shantanu's code. * * * * * O [ ]   RC  
Add ShapeTools capbilities to SurfStats.   * * * O O [ ]   CS  
add BrainVisa mesh file format reader and writer         O O O   CS  
Create tool(s) to measure surface uniformity.         O O O   BC CS,RC,RW
Create a protocol to automate generation BSE.   * * * O O O   RC RW
Update computer equipment. * * * * [ X ] [ X] [ X]   CS RW,BC
JNI bridge to C           * O   CS  
Last Update 1 October 2008