CCB SIG-DTI Tools
- Leviathan: a collection of DTI analysis and fiber tractography tools, coded in C++ and compiled for Windows, Mac OS X, and Solaris 10.
- Digital DTI Phantom Maker: Documentation and binaries for Windows, OS X, and Solaris 10 are located in /nethome/users/nhageman/public/Software.
- Single Tensor Reconstruction: Reconstructs a single tensor at each voxel from a DWI dataset. Running this program requires preprocessing of metadata using Lev File Utility
- Streamline Fiber Tracking: Performs streamline fiber tracking on single tensor data.
- Computation of Tract Statistics: Computes average value of DTI scalar measures along a collection of tracts.
The following tools are currently in their final stage of development, and the first release version will be deployed soon:
-
- Reconstruction Methods
- Spherical Deconvolution
- Q-Ball
- Fiber Tractography Methods
- Fast Marching
- Heat/Diffusion Based
- Fluid Mechanics Based
- Fiber Grouping Methods
- DIRAC (Diffusion Imaging Reconstruction and Analysis Collection): Contains tools for
- Diffusion tensor reconstruction and anisotropy index (FA, MD, etc.) calculation
- Q-ball reconstruction (HARDI)
- Spherical harmonic reconstruction (HARDI)
- Spherical deconvolution (HARDI)
- DIVA (Diffusion Imaging Visualization Application): Enables direct visualization of
- Diffusion tensor reconstructions
- Q-ball reconstructions
- Spherical harmonic reconstructions
- Spherical deconvolution reconstructions
- TensorViewer (deprecated -- use DIVA): A Java3D suite for visualizing DTI/HARDI data and tractography results. Documentation (renamed DIVA)
Other Tools
