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| Topics in CCB web: | Changed: (now 22:26) | Changed by: |
| InstallJava3DOnMacOSX | 21 Aug 2008 - 20:05 - NEW | CraigSchwartz |
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Notes on installing a Java3d !.5 version , using JOGL bindings, onto Mac OS X (from http://www.nofluffjuststuff.com/blog detail.jsp?rssItemId 97558) the waiting game ...
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| ShapeToolsMeetingsAndTemplates | 21 Aug 2008 - 20:00 - r1.44 | CraigSchwartz |
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CCB Shape Program Portable Geometry Tools
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| WebStatistics | 21 Aug 2008 - 10:05 - r1.809 | Main.guest |
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Statistics for CCB Web Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic save and uploads: Aug 2008 59882 138 4 ...
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| FileFormatSelectionGuide | 20 Aug 2008 - 21:43 - r1.5 | CraigSchwartz |
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A guide to surface file formats This web page is a short guide to the major surface and contour file formats used in LONI. It will help researchers determine which ...
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| ShapeToolsSurfStatsProjectDescription | 20 Aug 2008 - 19:43 - NEW | CraigSchwartz |
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!ShapeTools Plugin project definition Public web page of !ShapeToolsPluginLibrary TOC{depth "2"} Overview The !SurfStats matlab package, disributed by Dr. Keith Worsley ...
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| ShapeToolsLibraryProjectTemplate | 20 Aug 2008 - 19:32 - r1.3 | CraigSchwartz |
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Sub Project Name TOC{depth "2"} Version The version of the sub project Overview A description of the problem addressed by the project. Restrictions, Exclusions, Limitations ...
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| ShapeToolsPluginProjectDescription_v1_0 | 20 Aug 2008 - 19:28 - NEW | CraigSchwartz |
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!ShapeTools Plugin project definition Public web page of !ShapeToolsPluginLibrary TOC{depth "2"} Overview This project aims to add the expertise to use a plugin framework ...
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| Meetings19Aug2008 | 20 Aug 2008 - 18:48 - r1.3 | CraigSchwartz |
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Previous week Agenda and Notes for 19 Aug 2008 Shape Tools meeting prev. weeks to do CS investigate TWiki save error CS revise all !ShapeToolsIO writers to use ...
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| TWikiCommaBracketedTopic | 19 Aug 2008 - 18:18 - NEW | CraigSchwartz |
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text of MapContour follows, in case testing proves destructive... 19 aug 08 !MapContour Maps a contour according to a transform defined by the corrospondences of ...
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| MShape | 19 Aug 2008 - 18:09 - r1.15 | CraigSchwartz |
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mShape An interface to !ShapeTools from within Matlab TOC{depth "2"} Using !ShapeTools with SurfStat : A Case Study Objective: Increase the number of surface file ...
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| ShapeToolLibraryProgram | 19 Aug 2008 - 18:08 - r1.272 | CraigSchwartz |
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CCB Shape Program Portable Geometry Tools
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| MapContour | 19 Aug 2008 - 18:07 - r1.8 | CraigSchwartz |
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!MapContour Maps a contour according to a transform defined by the corrospondences of the faces of two homologous shapes. TOC{depth "2"} Description One approach ...
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| RegularDiscreteDataUserGuide | 14 Aug 2008 - 18:28 - r1.7 | RyanCabeen |
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Regular Discrete Data Tools User Guide TOC{depth "2"} Overview This library intends to provide a comprehensive and flexible data model and implementation for arbitrary ...
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| LandmarkWarpTools | 13 Aug 2008 - 19:06 - r1.39 | CraigSchwartz |
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Landmark Warp Tools This page describes a Java library and command-line toolkit that can be used to compute and apply warps that are guided by landmarks. Typically ...
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| Meetings12Aug2008 | 12 Aug 2008 - 23:38 - r1.2 | CraigSchwartz |
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Previous week Agenda and Notes for 12 Aug 2008 Shape Tools meeting prev. weeks to do CS Send !ShapeTools web links to Mona CS Create a !ShapeTools library binary ...
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| LandmarkWarpUserGuide1x0 | 12 Aug 2008 - 19:32 - r1.14 | RyanCabeen |
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Landmark Warp Tools Library User Guide TOC{depth "2"} Overview This is a library for estimating and applying transformations that are defined by landmark input/output ...
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| RegularDiscreteDataTools | 12 Aug 2008 - 18:16 - r1.9 | RyanCabeen |
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Regular Discrete Data Tools This package contains a Java library and several command-line tools that can be used to store and manipulate floating point data that ...
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| CreateFlyWingLandmarksDownloads | 12 Aug 2008 - 02:54 - NEW | RyanCabeen |
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Create Fly Wing Landmarks Downloads This section contains example files for download.
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| ShapeTTest | 12 Aug 2008 - 00:46 - r1.2 | CraigSchwartz |
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CCB !ShapeTools !ShapeTTest Calculates Independent and Dependent T-Test between measurements on two populations. Project Components Documentation ShapeTTest User ...
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| IndependentTTestProjectDefinitionV1x0 | 12 Aug 2008 - 00:45 - r1.4 | CraigSchwartz |
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!ShapeTTest Project Definition TOC{depth "2"} Overview This application will calculate the value of an Independent T-Test for each row of two tables of values. Arguments ...
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| Meetings04December2007 | 12 Aug 2008 - 00:45 - r1.9 | CraigSchwartz |
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Previous week Agenda for 4 December 07 Shape Tools meeting Review prior weeks to do items !BaeCheol work on application to blend 2 257x257 uif files Craig All Hands ...
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| Meetings11December2007 | 12 Aug 2008 - 00:45 - r1.8 | CraigSchwartz |
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Previous week Agenda for 11 December 07 Shape Tools meeting Review prior weeks to do items Craig prepare for and meet with Cornelius, re: Hippo shape analysis Craig ...
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| ShapeToolsFutureProjects | 12 Aug 2008 - 00:45 - r1.2 | CraigSchwartz |
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ShapeGroupMeasure Compares a reference shape and a group of other shapes. It's output may be analysed by ShapeTTest (obsoletes ShapeGroupDistance) .
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| ShapeTTestUserGuide1x0 | 12 Aug 2008 - 00:38 - NEW | CraigSchwartz |
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ShapeTTest Usage Guide Computes a T-Test on two population samples The sample values must be written into two delimited, ascii data files. Available t-test calculation ...
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| ShapeToDXUserGuide1x0 | 12 Aug 2008 - 00:21 - r1.4 | CraigSchwartz |
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CCB !ShapeToDX ShapeToDX is an application program that translates all shape file format that can be read by the CCB !ShapeTools library into an !OpenDX general format ...
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| ShapeToolsApplications | 12 Aug 2008 - 00:16 - r1.5 | CraigSchwartz |
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ShapeTools Applications BooleanListsThreshold : Filters a group of text lists containing boolean values. Color Surface : a java application that colors the vertices ...
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| ExtractAttributesUserGuide1x0 | 11 Aug 2008 - 23:36 - r1.2 | CraigSchwartz |
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ExtractAttributes Usage Guide Synopsis !ExtractAttributes is an application program that extracts the data attributes of a Shape file and, optionally, saves them ...
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| ShapeToolsCurrentProjects | 11 Aug 2008 - 21:02 - r1.2 | CraigSchwartz |
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Projects currently under development by ShapeTools Shape Viewer : Various improvements to the !ShapeViewer ShapeTools Library : A java library providing support functions ...
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| ShapeToolsSoftwareSuites | 11 Aug 2008 - 20:56 - NEW | CraigSchwartz |
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ShapeTools Software Suites (A Suite is a collection of libraries and applications that focus on a specific area) LandmarkWarpTools : A Java library and set of applications ...
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| ShapeToolsSoftwareLibraries | 11 Aug 2008 - 20:19 - r1.5 | CraigSchwartz |
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The java application libraries with which !ShapeTools applications are built. If you are a Java developer, you want these. If you don't know which libraries to use ...
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| ArrayIOLibrary | 11 Aug 2008 - 20:18 - r1.3 | CraigSchwartz |
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ArrayIO Library provides methods to read and write arrays from and to data files, hiding from the programmer the details of the particular file format used. When ...
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| ShapeToolsApplicationUsage | 08 Aug 2008 - 23:21 - NEW | CraigSchwartz |
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Using Shape Tools applications Nearly all !ShapeTools applications are written in the Java programming language. To use them, you must have installed a Java 1.5 compatible ...
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| SurfaceWarpProtocolFrequentlyAskedQuestions | 07 Aug 2008 - 21:52 - r1.3 | RyanCabeen |
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A collection of questions and answers about the surface warp protocol workflows. TOC{depth "2"} What happens if there are already results in a subject directory? ...
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| ShapeToolsLibraryFeaturesWishList | 07 Aug 2008 - 19:52 - r1.34 | CraigSchwartz |
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Feature Wish List for CCB !ShapeTools Library $ Feature: A short (1 or 2 words) name for the feature. $ Description: A longer description of the feature. $ Version ...
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| ShapeToolsLibraryDownloadOverview | 07 Aug 2008 - 19:26 - NEW | CraigSchwartz |
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Overview of the Shape Tools download package libraries The !ShapeTools software divides into applications and libraries. Because not all applications require all ...
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| ShapeToolsLibrary | 07 Aug 2008 - 19:13 - r1.55 | CraigSchwartz |
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Shape Tools Library Version 1.2.0 ShapeTools Library A Definition of a Shape. Feature Wish List Documentation Java Doc v1.2.0 Java Doc v1.3.0 Java Doc v1.3.1 Java ...
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| CCB_NCBC_AHM_2008 | 07 Aug 2008 - 16:20 - r1.10 | IvoDinov |
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2008 NCBC All-Hands Meeting, Bethesda, MD, August 13-14, 2008 CCB/NCBC Wiki Resources CCB Meetings Page CCB Collaborative Proposals CCB DBPs Logistics Official Meeting ...
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| ShapeToolsGuideToCreatingALoniSoftwareDownloadPackage | 06 Aug 2008 - 20:29 - NEW | CraigSchwartz |
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How to create a LONI Software Download Package TOC{depth "2"} Download Package Requirements For each software download package, the software download archivist needs ...
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| Meetings05Aug2008 | 05 Aug 2008 - 23:26 - r1.3 | CraigSchwartz |
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Previous week Agenda and Notes for 05 Aug 2008 Shape Tools meeting prev. weeks to do CS Surf Stat modifications CS review Voxel/World mapping interface CS computer ...
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| ImageCoordinateToolsProjectDefinitionV1x0 | 05 Aug 2008 - 20:32 - r1.6 | CraigSchwartz |
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!ImageCoordinate Project Definition This library provides methods that describes 3D image (volume) orientation and location in space. The library stores data representation ...
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| Meetings29July2008 | 05 Aug 2008 - 18:28 - r1.3 | CraigSchwartz |
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Previous week Agenda and Notes for 29 July 2008 Shape Tools meeting prev. weeks to do CS adapt !SurfStat (from K. Worsley) to !ShapeTools readers (Due 7/27/08) CS ...
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| NCBC_ToolIntegration_XMLtology_2006 | 02 Aug 2008 - 06:04 - r1.30 | IvoDinov |
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NCBC XMLtology for Tool Integration Overarching Goals The goals of this initiative is to generate an integrated pipeline of tools from all seven NCBCs. Preliminaries ...
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| ImageCoordinateToolsLibraryGlossary | 01 Aug 2008 - 20:37 - NEW | BaecheolShin |
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ImageCoordinateTools Glossary $ !Size : Number of voxels along axis. $ !Step : The distance between center of adjacent voxels. $ !Start : Position of origin of the ...
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| ImageCoordinateToolsExamplesVersion1x2 | 01 Aug 2008 - 20:30 - NEW | BaecheolShin |
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Image Coordinate Tools Library Examples Image Coordinate Tools version 1.0 #TableOfContentsAnchor TOC{depth "2"} Construct transformation matrix which maps between ...
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| ImageCoordinateTools | 01 Aug 2008 - 20:26 - NEW | BaecheolShin |
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Image Coordinate Tools Library Version 1.0.0 This library provides methods that describes 3D image (volume) orientation and location in space. The library stores ...
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| UsingInterpolateContour | 30 Jul 2008 - 20:35 - r1.7 | BaecheolShin |
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Using !InterpolateContour !InterpolateContour is a command line program that interpolates the contour vertices and data attributes in a Ucf, or Minc Contour object ...
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| ContourMatchingToolsProjectDefinitionV1x0 | 30 Jul 2008 - 19:42 - r1.2 | ShantanuJoshi |
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Contour Matching Tools project definition Public web page of ContourMatchingTools TOC{depth "2"} Overview This page is a preliminary definition of a collection of ...
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| InterpolateContourProjectDefinitionV1x1 | 25 Jul 2008 - 18:02 - r1.2 | BaecheolShin |
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!InterpolateContour Project Definition TOC{depth "2"} Overview Write an application that interpolates contours. Restrictions, Exclusions, Limitations Only works on ...
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| Meetings22July2008 | 23 Jul 2008 - 20:50 - r1.2 | CraigSchwartz |
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Previous week Agenda and Notes for 22 July 2008 Shape Tools meeting prev. weeks to do CS Fix shape viewer bugs CS create software download pacakges for shape tools ...
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| ColorSurfaceFAQ | 23 Jul 2008 - 19:36 - r1.2 | BaecheolShin |
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Table of Contents TOC{depth "2"} What image file does the !ColorSurface support? For the first version, the Analyze and Minc image files are supported. However any ...
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Number of topics: 50